fafbseg.flywire.skeletonize_neuron_parallel#

fafbseg.flywire.skeletonize_neuron_parallel(ids, n_cores=1, progress=True, **kwargs)[source]#

Skeletonization on parallel cores.

Parameters:
  • ids (iterable) – Root IDs of neurons you want to skeletonize.

  • n_cores (int) – Number of cores to use. Don’t go too crazy on this as the downloading of meshes becomes a bottle neck if you try to do too many at the same time. Keep your internet speed in mind. For reference: with 100Mbps internet, I can comfortably run on 8 cores with some room to spare.

  • **kwargs – Keyword arguments are passed on to skeletonize_neuron.

Return type:

navis.NeuronList

See also

fafbseg.flywire.skeletonize_neuron()

The function called for individual neurons.