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fafbseg.flywire.encode_url

fafbseg.flywire.encode_url(segments=None, annotations=None, coords=None, skeletons=None, dataset='production', scene=None, open_browser=False, to_clipboard=False, short=True)

Encode data as flywire neuroglancer scene.

Parameters

• segments (int | list of int) – Segment IDs to have selected.

• annotations ((N, 3) array) – 2d of xyz coordinates that will be added as annotation layer. If you need more control over this, see fafbseg.flywire.add_annotation_layer().

• coords ((3, ) array) – (X, Y, Z) pixel coordinates to center on.

• skeletons (navis.TreeNeuron | navis.CatmaidNeuron | NeuronList) – Skeleton(s) to add as annotation layer(s).

• dataset ('production' | 'sandbox') – Segmentation dataset to use.

• scene (dict | str) – If you want to edit an existing scene, provide it either as already decoded dictionary or as string that can be interpreted by fafbseg.flywire.decode_url().

• open_brower (bool) – If True, will open the url in a new tab of your webbrowser. By default, we will first try to open in Google Chrome and failing that fall back to your default browser.

• to_clipboard (bool) – If True, will copy URL to clipboard.

• short (bool) – If True, will make a shortened URL.

Returns

url

Return type

str

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